Wednesday, February 14, 2018


Stem cells that produce sperm use a genetic trick to stay perpetually young across generations, researchers at the University of Michigan (UM) Life Sciences Institute have discovered.
The results have been newly reported in the journal eLife.
Certain sections of the fruit fly genome get shorter with age. But remarkably, some reproductive cells can repair the shrinkage, and this genomic shrinkage may underlie aspects of aging and hint at ways that select cells might thwart it.
In the study, UM researchers focused on workhorse genes encoded in ribosomal DNA, or rDNA. These genes carry instructions for the parts that make up ribosomes, cellular machines that turn RNA molecules into every protein needed in the body.
In fruit flies, chains of rDNA genes are found on the X and Y chromosomes. Compared with young male fruit flies, old males had a shortage of rDNA genes on the Y chromosome, leaving them with a shrunken Y chromosome.
Moreover, this dearth of rDNA seems to be passed on from generation to generation. Geriatric fly fathers, those 40 days old, passed on their reduced number of rDNA genes to their sons, UM researchers found. These sons had considerably fewer copies of rDNA genes than sons born to younger fathers.
Then the researchers saw something surprising. In many cases, this rDNA loss reversed itself. At about 10 days of age, sons born to old fathers had recovered enough rDNA to be comparable to sons born to young fathers.
"This recovery was something we really didn't expect," said UM Life Sciences Institute faculty member Yukiko Yamashita.
The results suggest that rDNA rejuvenation in sons might be a crucial aspect of how stem cells persist from father to son. The researchers do not yet know whether such a reset can happen to female stem cells in the ovaries.
Until now, researchers had observed the phenomenon only in yeast. If the results hold true for humans, they could offer insight into how most cells deteriorate over time.
Being pushed, Yamashita would wager that some types of immortal cells in people can perform the same rejuvenating trick to prevent the rDNA declines that come with age.

My God, Inout Scripts Adserver is full of errors and warnings


I checked the Inout Scripts Adserver script with http://infohound.net/tidy/. To my surprise, there are still 1 error and 134 warnings with it after 15 months troubleshooting with Inoutscripts supporters Nair and Saranya.
In addition, most of the addons are not working at all.

The inoutscripts software has security vurnerability. It had been attacked 3 times.

These Inout Scripts Scammers had never got these bug fixed. They just took cash and left me nothing working.



Monday, February 12, 2018

Recombinant DNA technology


Recombinant DNA technology, joining together of DNA molecules from two different species that are inserted into a host organism to produce new genetic combinations that are of value to science, medicine, agriculture, and industry. Since the focus of all genetics is the gene, the fundamental goal of laboratory geneticists is to isolate, characterize, and manipulate genes. Although it is relatively easy to isolate a sample of DNA from a collection of cells, finding a specific gene within this DNA sample can be compared to finding a needle in a haystack. Consider the fact that each human cell contains approximately 2 metres (6 feet) of DNA. Therefore, a small tissue sample will contain many kilometres of DNA. However, recombinant DNA technology has made it possible to isolate one gene or any other segment of DNA, enabling researchers to determine its nucleotide sequence, study its transcripts, mutate it in highly specific ways, and reinsert the modified sequence into a living organism.

DNA Cloning


In biology a clone is a group of individual cells or organisms descended from one progenitor. This means that the members of a clone are genetically identical, because cell replication produces identical daughter cells each time. The use of the word clone has been extended to recombinant DNA technology, which has provided scientists with the ability to produce many copies of a single fragment of DNA, such as a gene, creating identical copies that constitute a DNA clone. In practice the procedure is carried out by inserting a DNA fragment into a small DNA molecule and then allowing this molecule to replicate inside a simple living cell such as a bacterium. The small replicating molecule is called a DNA vector (carrier). The most commonly used vectors are plasmids (circular DNA molecules that originated from bacteria), viruses, and yeast cells. Plasmids are not a part of the main cellular genome, but they can carry genes that provide the host cell with useful properties, such as drug resistance, mating ability, and toxin production. They are small enough to be conveniently manipulated experimentally, and, furthermore, they will carry extra DNA that is spliced into them.

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Finally, they said they could install Nutch in place of the Inout Spider. The Nesote charged me $480 for the installation Nutch and integration with Inout Scripts search engine v8.

They told me they were working perfect.

To my surprise, the Nutch just had 6 GB sample data and di not increase in the last 4 months. Again, they took the cash and left me nothing working. They said everything was working.

What Indian scammers they are!  They are the world's leading scamming scripts on earth. These criminal guys are still cheating the customers all over the world.

The phishing scammers are Jacob, Kumar, Nair, and Saranya.




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They said: “Premium e-Commerce platform with Multi-Vendor capability. Start your own online shopping cart with multiple sellers, brands, categories in any currency. Sell physical or digital products in cyberspace to any buyer around the world. Inout Shopping Cart is far more than a storefront to sell your products. You can turn your ecommerce platform into a fully diverse multi-vendor shopping portal. More vendors, more buyers.”
1.      I purchased this inout script one year ago, but I had to give up finally.  Why?
2.      There are 8 bugs and 23 warnings by code checking.
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4.      The database was attacked 3 times.
5.      The technique support never solved the issues.
6.      They always blamed the servers, even though the servers were properly set up, and did not have errors by third party organization.
7.      The site and its owner would be sued by vendors at any time. It was a potential loss of huge money.


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Inout Scripts Review: Advantages and Disadvantages

https://www.complaintsboard.com/inout-scripts-b120320

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Get answers from the Inout Scripts staff and other customers. ... Inout Scripts offers products / scripts that provide various business opportunities across the E-business world. ... Inout Adserver - Manage your own Ad Server.
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Jun 20, 2013 - Recently I spent over $400 on software to run my new search engine website and looking around, decided that InOutScripts.com was the best choice to use, due to all of it´s features that are listed on its sales page, how I was wrong! The corrospondence was great and many promises were made, including ...
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Friday, February 9, 2018

E. coli Transformation


Long
1) Get 200ul aliquots of E. coli (DH5a for normal transformation or DE3 for expression) from -80C freezer and let thaw on ice.
2) Add DNA
For plasmid: 1ul DNA desired
For ligation: 10ul ligation reaction
-Also include a negative control with no DNA.
3) Incubate for 30min on ice.
4) Heat shock for 90sec at 42C.
5) Incubate for 1min on ice.
6) Add 1ml LB.
7) Agitate at 37C for 45min – 2hrs (1hr is good).
8) Spin down and pour off LB leaving ~100ul.
9) Resuspend cells in the ~100ul.
10) Plate the entire suspension on appropriate prewarmed plates.
11) Incubate at 37C overnight.

Short
Note: Use for amplifying AmpR plasmids only.
1) Get 200ul aliquots of E. coli (DH5a) from -80C freezer and let thaw on ice.
2) Aliquot 50ul of cells into tubes.
3) Add 1ul DNA desired.
4) Incubate on ice 5min-30min.
5) Plate on prewarmed LB-Amp plates. (Plate the whole thing--no spinning, no nothing).
6) Incubate at 37C overnight.
Blue/White Selection
-Used for plasmids like Bluescript.
-No insert=Blue. Insert=White.
-Do long transformation of ligations basically as described above.
-While cells are agitating,
A) Spread X-Gal and IPTG on plates.
X-Gal (50mg/ml): 20ul
IPTG (1M): 10ul
B) Incubate at 37C to dry (about 30min).


E. coli Miniprep


1) Grow 2ml culture o/n.
2) Spin down. Pour off all but ~100ul of sup. Resuspend cells in the ~100ul.
3) Add 130ul P1. Resuspend.
4) Add 130ul P2. Mix immediately.
5) Add 182ul N3. Mix immediately.
6) Spin 10 min at 4C. (Removes genomic DNA and debris).
7) Transfer sup to a fresh eppendorf.
8) Add 900ul ice-cold 100% EtOH (bottom shelf in door of -20C freezer). Mix thoroughly.
9) Spin 15min at 4C. Discard sup.
10) Wash pellet once with ~400ul ice-cold 70% EtOH.
11) Dry pellet on rack or in speedy-vac.
12) Resuspend in 50ul water. Use 3-10ul for digest.

Bioprotocols of Molecular Biology




One-Tube Isolation of DNA from Mouse Tails
Michael R. Green
   
and Joseph Sambrook
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot093534
   
   
Buffers
Michael R. Green
   
and Joseph Sambrook
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.top098210
   
   
Caring for Escherichia coli
Michael R. Green
   
and Joseph Sambrook
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot101337
   
   
Protein Immunodepletion and Complementation in Xenopus laevis Egg Extracts
Christopher Jenness, 

David J. Wynne, 

and Hironori Funabiki
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot097113
   
Analysis of Mitotic Checkpoint Function in Xenopus Egg Extracts
Yinghui Mao
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot099853
   
Transformation of Schizosaccharomyces pombe in a 96-Well Format
Assen Roguev, 

Jiewei Xu, 

and Nevan J. Krogan
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot091942
   
   
DNA Preparation from Schizosaccharomyces pombe
Assen Roguev, 

Jiewei Xu, 

and Nevan J. Krogan
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot091959
   
   
Preparation of Plasmid DNA by Alkaline Lysis with Sodium Dodecyl Sulfate: Maxipreps
Michael R. Green
   
and Joseph Sambrook
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot093351
   
   
A Single-Step Method for the Simultaneous Preparation of DNA, RNA, and Protein from Cells and Tissues
Michael R. Green
   
and Joseph Sambrook
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot093500
   
   
Gateway Recombinational Cloning
John S. Reece-Hoyes
   
and Albertha J.M. Walhout
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.top094912
   
   


Propagating Gateway Vectors

John S. Reece-Hoyes
   
and Albertha J.M. Walhout
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot094920
   
   
Generating an Open Reading Frame (ORF) Entry Clone and Destination Clone
John S. Reece-Hoyes
   
and Albertha J.M. Walhout
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot094938
   
   
Using Multisite LR Cloning to Generate a Destination Clone
John S. Reece-Hoyes
   
and Albertha J.M. Walhout
Cold Spring Harb Protoc 2018; doi:10.1101/pdb.prot094946
   
   
Preparation of DNA from Embryonic Stem Cells or Other Cultured Cells
Richard Behringer, 

Marina Gertsenstein, 

Kristina Vintersten Nagy, 

and Andras Nagy
Cold Spring Harb Protoc 2017; doi:10.1101/pdb.prot092718
   
   
Analysis of DNA Methylation in Mammalian Cells
Paul M. Lizardi, 

Qin Yan, 

and Narendra Wajapeyee
Cold Spring Harb Protoc 2017; doi:10.1101/pdb.top094821
   
   
Methylation-Specific Polymerase Chain Reaction (PCR) for Gene-Specific DNA Methylation Detection
Paul M. Lizardi, 

Qin Yan, 

and Narendra Wajapeyee
Cold Spring Harb Protoc 2017; doi:10.1101/pdb.prot094847
   
   
Methyl-Cytosine-Based Immunoprecipitation for DNA Methylation Analysis
Paul M. Lizardi, 

Qin Yan, 

and Narendra Wajapeyee
Cold Spring Harb Protoc 2017; doi:10.1101/pdb.prot094854
   
   
High-Throughput Deep Sequencing for Mapping Mammalian DNA Methylation
Paul M. Lizardi, 

Qin Yan, 

and Narendra Wajapeyee
Cold Spring Harb Protoc 2017; doi:10.1101/pdb.prot094862
   
   
Preparation of Single-Stranded Bacteriophage M13 DNA by Precipitation with Polyethylene Glycol
Michael R. Green
   
and Joseph Sambrook
Cold Spring Harb Protoc 2017; doi:10.1101/pdb.prot093419
   
   
Growing Bacteriophage M13 in Liquid Culture
Michael R. Green
   
and Joseph Sambrook
Cold Spring Harb Protoc 2017; doi:10.1101/pdb.prot093435
   
   


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Tuesday, February 6, 2018

Cloned monkeys could help development of drugs for human brain diseases

Chinese scientists' successful cloning of monkeys could eventually help the development of new drugs to treat human diseases, like brain and nervous system problems, a leading Chinese neuroscientist said.
At the end of 2017, a non-human primate research facility under the Beijing-based Chinese Academy of Sciences (CAS) produced two cloned macaques.
Allaying fears that cloning monkeys for research could ultimately lead to human cloning, Poo Muming, director of the Institute of Neuroscience at CAS, told Xinhua, "We have no intention to clone humans."
The macaque cloning was done for a humane reason, he said: "Because this is the species that will really help human health and cure human disease."
The cloning will reduce the use of large numbers of primates for research, especially in the West.
In 2016, the United States used over 71,000 primates for research or experimentation, according to the U.S. Department of Agriculture's animal and plant health inspection service.
U.S. pharmaceutical companies import at least 50,000 monkeys every year to test the efficacy of different drugs and determine safe doses for human clinical trials, Poo said.
"That is a huge number of monkeys used, which you should consider unethical," he said.
Since these monkeys have diverse genetic backgrounds, researchers must use a large number to make sure that the observed effects are due to treatment and not because of the genetic variation.
"Cloning is really the way to go," Poo said. "Because it reduces the interference (of) the diversity of genetic background on drug development. So it is for (that) ethical reason that we (have cloned) monkeys."
Darren Griffin, genetics professor at the University of Kent, holds the same view.
"If they can produce these cloned animals that means that you could use fewer animals for ... research, rather than the number being used at the moment," he said in a previous interview with Xinhua.
At present, the medical community mostly uses mice as a model to research cures for human diseases. But for many diseases, especially brain diseases, drugs that are developed using mice as model have failed clinical trials in humans, Poo said.
"Basically all big pharmas have given up developing neuro drugs," he said, citing two decades of drug development failure, with hundreds of billions of dollars spent on each drug.
"Next, we want to develop clones of animals that carry brain disorders," he said, especially degenerative or development diseases that have clear genetic causes.
Poo said he would like to focus on Alzheimer's, Parkinson's, autism and ALS, a nervous system disorder that causes disability.
Regarding the debate on the ethics of non-human primate cloning, he said every new technology is a two-edged sword: "There will be discussions and we'll see how the society deals with it."
In the 1970s, when genetic engineering technology first came out, he said everybody was worried about its harmful effect on humans.
"But so far, it has been 40 to 50 years and you don't see any real problem yet," he said.
"Cloned monkeys could be very valuable in studying specific aspects of human disease," said Tom Holder, director of Speaking of Research, an international organization that supports the use of animals in scientific labs.
"The breakthrough has shown that it is possible," Holder said in an emailed interview to Xinhua. "But it is too early to make any conclusions on whether the method will be able to be repeated efficiently and reliably."
Holder also said non-human primate research is subject to increased ethical and welfare considerations and is generally used only when other species are unsuitable for the research.

Tailed spider trapped in 100-million-year old amber offers insight in evolution

A spider-like creature bearing a long tail has been discovered in an amber from Myanmar dating back about 100 million years.
"There's been a lot of amber being produced from northern Myanmar and its interest stepped up about ten years ago when it was discovered this amber was mid-Cretaceous," said Paul Selden, a palaeontologist at the University of Kansas and an author of a paper on the ancient arachnid.
"Therefore, all the insects found in it were much older than first thought," Selden told the university in an interview.
The finding is published Monday in a paper in Nature Ecology & Evolution by an international team of researchers from the United States, China, Germany and the United Kingdom.
According to the paper, the creature shares many similarities with modern spiders including fangs, eight legs and silk-producing spinners.
Moreover, it also bears a long flagellum, or a tail, at its rear, which is not commonly seen among modern spiders.
Thought the ancient arachnid has a tiny body, only about 2.5 millimeters long, it had a tail nearly twice of its body length.
"Any sort of flagelliform appendage tends to be like an antenna," Selden said, "It's for sensing the environment. Animals that have a long whippy tail tend to have it for sensory purposes."
The tailed arachnid, named Chimerarachne after the Greek mythological Chimera, documents a key transition stage in spider evolution.
Previously, Selden and his colleagues had found similar insects without spinnerets from the much older Devonian and Permian periods.
"That's why the new one is really interesting, apart from the fact that it's much younger -- it seems to be an intermediate form," Selden said.
"In our analysis, it comes out sort of in between the older one that hadn't developed the spinneret and modern spider that has lost the tail," he added.

Most reviewed 13 Inoutscripts Softwares

Generally speaking, inoutscripts guys are a phishing scamming team. Their scripts are full of bugs and errors. Nothing is working. They did not give any effective support. Some of them are 10 years old without updating. 

If you are a victim of inoutscripts, please don't hesitate to contact me. Let's bring these bad guys to justice together.

Reviews:
1.     I have used most of these Inout Scripts. I purchased 13 of them.
2.     They are just liars, since they don't have the technology of big data. The hypertable/Hadoop is not working at all. It would take 50 years to fill 10 TB storage according to our calculation. The Inout spider can just crawl about 2000 pages per day.
3.     Some of the inourscripts can cause the server down, since they produce a ton of error log every day. 
4.     The sites are super slow. They will blame you whichever servers you use. I tried our own servers and bluehost. The results were the same. Our own sites have been running very fast.
5.     The inout search engine is not compatible with inout spider. It brings results not consistent with keywords.
6.     The inout scripts are not SEO. You can just get little traffic however you try.
7.     The webportal is not working. You'll never get something like Yahoo as they overstated.
8.     The cronjob of inoutscripts adserver is not working. The addons are not compatible.
9.     The inout articlebase has injection defects.
10. The inout celebrities is not responsive design. If you need a mobile mode, they will charge $480-800 as customization.
11. The inout queryspace is still using PHP 5.4 which is not supported by the official site.
12. The webmail ultimate can't be used to send or receive emails. It is a knid of malware that will get security warning from chrome and google.
13. I purchased 4 APPs, but they did not give me any one.
14. You can log into the inout socialtitles but can't log out from it sometimes. It does not have an email confirmation and recap feature. If you need these functions, they will charge you for customization. My site were attacked and spammed repeatedly.
15. They never refund you once you transfer the $$$. Yes, you'll never get any effective support from the staff.
16. Just a few of them here. I'll tell you uch more bugs and errors of Inout Scripts later.
The below are all the InoutScripts:

21 scripts in over 115 countries
All Advertising Solutions Search Solutions Email Solutions Portal Solutions Mobile Apps
Inout
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Meta Search Engine Script with multiple API support. Google Clone.
Inout
Spider
Powerful Web Crawler Script. A Googlebot Clone for Small/Medium Business
Inout
Site Search
Fast & Simple Site Search. Let visitors find what they are looking for. Quickly!
Inout
Adserver
Ad serving & Ad Management Script. Adwords & Adsense Clone.
Inout
Email Marketer
Bulk Mailing & List Management Script. Reach Your Market directly.
Inout
PPC Engine
Powerful Ad management combined with standard Pay Per Click Script.
Inout
Webmail
Powerful Webmail solution for small business.
Inout
Support Desk Manager
Professional customer support & ticketing solution.
Inout
RealEstate
Premium Real Estate Property Management Script. Trulia/Realtor/Zillow Clone.
Inout
StickBoard
Premium Pin and Board Style Social Photo/Video Sharing Script.
Inout
EasyRooms
Space Rental and Vacation Rental Script. Airbnb Clone Script.
Inout
Shopping Cart
Multi-Vendor Shopping cart. Ready for eCommerce.
Inout
Music
Most powerful Music selling & sharing script on the market.
Inout
Video
Video Sharing Portal. A YouTube clone with Ads Enabled.
Inout
SmartDeal
Group Deals Script. A Groupon & LivingSocial Clone.
Inout
Queryspace
Question & Answer Script.
Inout
CareerLamp
Meticulously Designed Job Portal Website. A Monster.com Clone.
Inout
Web Portal
Start your own Web Portal.Combine multiple scripts
Inout
SocialTiles
Social Media Clone Script. Facebook Clone Script.
Inout
Article Base
Content Management System (CMS). Blogs, articles and more.
Inout
Celebrities
Gossip, News & More. Premium Entertainment Portal
ioMob
Tunes
Most Powerful Music Selling & Sharing Script on the Market.
ioMob
Cart
eCommerce Mobile App for small to medium businesses around the world.

ioMob
Rooms
App for easy and flexible Vacation & Space Rentals.